euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

163 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip65 chr1 14552604 14552604 . unknown germline . no 231 .
srip133 chr1 24775171 24775171 + unknown germline . no 231 NIPAL3
srip154 chr1 28515499 28515499 . unknown germline . no 231 PTAFR
srip1800 chr1 75192898 75192898 - unknown germline . no 231 CRYZ
srip2074 chr1 83609736 83609736 - unknown germline . no 231 .
srip2808 chr1 101978985 101978985 - unknown germline . no 231 .
srip3059 chr1 102568916 102568916 + unknown germline . no 231 .
srip3191 chr1 105028221 105028221 + unknown germline . no 231 .
srip3897 chr1 119553359 119553359 + unknown germline . no 231 .
srip4115 chr1 149308428 149308428 + unknown germline . no 231 LOC645262
srip6845 chr1 221827812 221827812 - unknown germline . no 231 .
srip6990 chr1 225272509 225272509 + unknown germline . no 231 DNAH14
srip7387 chr1 242311569 242311569 + unknown germline . no 231 PLD5
srip9537 chr10 68803690 68803690 + unknown germline . no 231 LRRTM3;CTNNA3
srip9704 chr10 76230337 76230337 . unknown germline . no 231 ADK
srip9787 chr10 80529021 80529021 . unknown germline . no 231 .
srip10593 chr10 91717640 91717640 - unknown germline . no 231 .
srip12545 chr11 15380252 15380252 + unknown germline . no 231 .
srip12796 chr11 25123346 25123346 - unknown germline . no 231 .
srip13815 chr11 33670130 33670130 + unknown germline . no 231 C11orf41
srip15367 chr11 58171843 58171843 + unknown germline . no 231 .
srip16799 chr11 87991576 87991576 - unknown germline . no 231 .
srip17668 chr11 104556129 104556129 - unknown germline . no 231 .
srip19262 chr11 134305645 134305645 - unknown germline . no 231 .
srip19613 chr12 8105616 8105616 + unknown germline . no 231 .
srip19753 chr12 11191379 11191379 - unknown germline . no 231 PRH1-PRR4
srip19894 chr12 11219195 11219195 - unknown germline . no 231 PRH1-PRR4
srip20132 chr12 12933687 12933687 - unknown germline . no 231 APOLD1
srip20362 chr12 22085949 22085949 + unknown germline . no 231 ABCC9
srip21175 chr12 34017331 34017331 - unknown germline . no 231 .
srip22229 chr12 43256979 43256979 - unknown germline . no 231 .
srip22827 chr12 48929057 48929057 + unknown germline . no 231 .
srip23518 chr12 71103834 71103834 + unknown germline . no 231 PTPRR
srip26116 chr12 126655233 126655233 + unknown germline . no 231 .
srip26907 chr13 22489798 22489798 + unknown germline . no 231 .
srip29638 chr13 61734491 61734491 + unknown germline . no 231 .
srip29948 chr13 66891877 66891877 . unknown germline . no 231 PCDH9
srip30436 chr13 74613212 74613212 - unknown germline . no 231 KLF12
srip30985 chr13 79259790 79259790 - unknown germline . no 231 .
srip31451 chr13 85871603 85871603 - unknown germline . no 231 .
srip33516 chr13 104296230 104296230 - unknown germline . no 231 .
srip35204 chr14 28301256 28301256 + unknown germline . no 231 .
srip35337 chr14 30525254 30525254 + unknown germline . no 231 .
srip35865 chr14 36674752 36674752 + unknown germline . no 231 .
srip36306 chr14 39875089 39875089 + unknown germline . no 231 FBXO33
srip37043 chr14 49123540 49123540 + unknown germline . no 231 .
srip37050 chr14 49865556 49865556 + unknown germline . no 231 .
srip37176 chr14 58292592 58292592 + unknown germline . no 231 SLC35F4
srip38639 chr14 86381803 86381803 - unknown germline . no 231 .
srip39517 chr15 34031845 34031845 - unknown germline . no 231 RYR3
srip39740 chr15 37707890 37707890 - unknown germline . no 231 .
srip40235 chr15 47507335 47507335 - unknown germline . no 231 SEMA6D
srip41039 chr15 55850550 55850550 + unknown germline . no 231 PYGO1
srip42655 chr15 88964428 88964428 - unknown germline . no 231 .
srip43250 chr15 100931152 100931152 - unknown germline . no 231 .
srip45191 chr16 32525616 32525616 - unknown germline . no 231 .
srip46329 chr16 71028016 71028016 + unknown germline . no 231 HYDIN
srip46401 chr16 76865783 76865783 - unknown germline . no 231 .
srip46555 chr17 6341656 6341656 - unknown germline . no 231 .
srip47017 chr17 25303557 25303557 + unknown germline . no 231 .
srip47200 chr17 28398310 28398310 + unknown germline . no 231 EFCAB5
srip48753 chr18 9210425 9210425 + unknown germline . no 231 ANKRD12
srip48882 chr18 12491257 12491257 + unknown germline . no 231 SPIRE1
srip50740 chr18 51762737 51762737 - unknown germline . no 231 .
srip51842 chr18 74960069 74960069 - unknown germline . no 231 .
srip52751 chr2 6798282 6798282 - unknown germline . no 231 .
srip53470 chr2 23191008 23191008 - unknown germline . no 231 .
srip53612 chr2 23333460 23333460 . unknown germline . no 231 .
srip54265 chr2 36570259 36570259 - unknown germline . no 231 .
srip54647 chr2 42051410 42051410 + unknown germline . no 231 .
srip56223 chr2 82098035 82098035 + unknown germline . no 231 .
srip58566 chr2 144010786 144010786 + unknown germline . no 231 ARHGAP15
srip59193 chr2 147020925 147020925 + unknown germline . no 231 .
srip59699 chr2 166124136 166124136 + unknown germline . no 231 SCN2A
srip62216 chr2 227707651 227707651 + unknown germline . no 231 RHBDD1
srip62364 chr2 230341561 230341561 + unknown germline . no 231 DNER
srip62629 chr2 235519802 235519802 + unknown germline . no 231 .
srip63465 chr20 16479499 16479499 - unknown germline . no 231 KIF16B
srip64035 chr20 25895497 25895497 - unknown germline . no 231 .
srip64773 chr20 41952105 41952105 - unknown germline . no 231 .
srip65252 chr20 59972445 59972445 + unknown germline . no 231 CDH4
srip65637 chr21 19082370 19082370 - unknown germline . no 231 .
srip65851 chr21 19517305 19517305 - unknown germline . no 231 .
srip67241 chr22 19210904 19210904 + unknown germline . no 231 CLTCL1
srip67495 chr22 22486374 22486374 - unknown germline . no 231 IGL@
srip67856 chr22 22715595 22715595 + unknown germline . no 231 IGL@
srip68760 chr22 44324597 44324597 - unknown germline . no 231 PNPLA3
srip70553 chr3 21234921 21234921 + unknown germline . no 231 .
srip71081 chr3 26524455 26524455 - unknown germline . no 231 .
srip72718 chr3 55788574 55788574 + unknown germline . no 231 ERC2
srip73385 chr3 59852896 59852896 + unknown germline . no 231 FHIT
srip73792 chr3 75101217 75101217 + unknown germline . no 231 .
srip75581 chr3 85576556 85576556 + unknown germline . no 231 CADM2
srip76207 chr3 101279650 101279650 + unknown germline . no 231 .
srip76686 chr3 109849973 109849973 + unknown germline . no 231 .
srip77248 chr3 123590719 123590719 + unknown germline . no 231 MYLK
srip77402 chr3 130333892 130333892 - unknown germline . no 231 COL6A6
srip79872 chr3 169269958 169269958 + unknown germline . no 231 MECOM
srip80239 chr3 175677977 175677977 - unknown germline . no 231 .
srip80342 chr3 176091325 176091325 + unknown germline . no 231 .
srip81486 chr3 186372132 186372132 + unknown germline . no 231 .
srip82118 chr3 193354172 193354172 - unknown germline . no 231 OPA1
srip82416 chr4 11719071 11719071 . unknown germline . no 231 .
srip82982 chr4 18162684 18162684 - unknown germline . no 231 .
srip84712 chr4 47007787 47007787 - unknown germline . no 231 .
srip86173 chr4 66413931 66413931 + unknown germline . no 231 EPHA5
srip87331 chr4 80768529 80768529 + unknown germline . no 231 GDEP
srip89967 chr4 112628966 112628966 + unknown germline . no 231 .
srip90345 chr4 115132699 115132699 + unknown germline . no 231 .
srip90800 chr4 120717537 120717537 - unknown germline . no 231 .
srip92801 chr4 138177329 138177329 + unknown germline . no 231 .
srip95384 chr4 190659701 190659701 + unknown germline . no 231 .
srip96073 chr5 8749521 8749521 + unknown germline . no 231 .
srip96093 chr5 8930424 8930424 - unknown germline . no 231 .
srip96897 chr5 21207723 21207723 . unknown germline . no 231 .
srip99512 chr5 68263468 68263468 - unknown germline . no 231 .
srip100740 chr5 89450775 89450775 + unknown germline . no 231 .
srip101080 chr5 96866415 96866415 + unknown germline . no 231 .
srip104896 chr5 155339867 155339867 - unknown germline . no 231 .
srip105730 chr5 160435672 160435672 - unknown germline . no 231 .
srip107507 chr6 13503042 13503042 + unknown germline . no 231 .
srip108170 chr6 39219886 39219886 . unknown germline . no 231 .
srip108737 chr6 47183045 47183045 + unknown germline . no 231 .
srip109127 chr6 57494221 57494221 - unknown germline . no 231 PRIM2
srip110569 chr6 76980205 76980205 . unknown germline . no 231 .
srip111047 chr6 77980645 77980645 - unknown germline . no 231 .
srip111307 chr6 82147774 82147774 - unknown germline . no 231 .
srip111406 chr6 85929801 85929801 . unknown germline . no 231 .
srip112693 chr6 102283763 102283763 - unknown germline . no 231 GRIK2
srip113494 chr6 130107444 130107444 + unknown germline . no 231 .
srip113815 chr6 142450105 142450105 - unknown germline . no 231 .
srip116045 chr7 3264466 3264466 - unknown germline . no 231 .
srip116292 chr7 17094707 17094707 + unknown germline . no 231 .
srip117902 chr7 57768879 57768879 - unknown germline . no 231 LOC100287663
srip118313 chr7 62492941 62492941 + unknown germline . no 231 .
srip118510 chr7 66591179 66591179 - unknown germline . no 231 TYW1
srip118887 chr7 70188682 70188682 - unknown germline . no 231 AUTS2
srip120416 chr7 88825840 88825840 + unknown germline . no 231 ZNF804B
srip121740 chr7 107829256 107829256 + unknown germline . no 231 NRCAM
srip121995 chr7 108325669 108325669 + unknown germline . no 231 .
srip122283 chr7 110484751 110484751 + unknown germline . no 231 IMMP2L
srip124068 chr8 4452901 4452901 - unknown germline . no 231 CSMD1
srip124395 chr8 5829282 5829282 - unknown germline . no 231 .
srip125447 chr8 24926547 24926547 - unknown germline . no 231 .
srip126469 chr8 64668568 64668568 - unknown germline . no 231 .
srip127006 chr8 72013164 72013164 + unknown germline . no 231 .
srip127456 chr8 72399228 72399228 - unknown germline . no 231 .
srip128023 chr8 83740686 83740686 + unknown germline . no 231 .
srip128281 chr8 87315042 87315042 + unknown germline . no 231 .
srip128454 chr8 92186274 92186274 - unknown germline . no 231 LRRC69
srip131087 chr9 6290487 6290487 + unknown germline . no 231 .
srip132566 chr9 30674459 30674459 - unknown germline . no 231 .
srip132861 chr9 32092741 32092741 - unknown germline . no 231 .
srip133412 chr9 32463891 32463891 - unknown germline . no 231 DDX58
srip133618 chr9 34904794 34904794 - unknown germline . no 231 .
srip135090 chr9 105073661 105073661 . unknown germline . no 231 .
srip135585 chr9 111564966 111564966 + unknown germline . no 231 .
srip137225 chrX 54917144 54917144 + unknown germline . no 231 .
srip137261 chrX 55088047 55088047 . unknown germline . no 231 .
srip139450 chrX 85781790 85781790 + unknown germline . no 231 DACH2
srip140805 chrX 119892837 119892837 - unknown germline . no 231 .
srip141387 chrX 129525275 129525275 - unknown germline . no 231 .
srip142230 chrY 9953038 9953038 + unknown germline . no 231 .